FORMALDEHYDE DEHYDROGENASE from Pseudomonas sp.
Appearance | White amorphous powder, lyophilized | |
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Activity | GradeⅡ 1.0 U/mg-solid or more (containing approx. 70% of stabilizers) |
|
Contaminant | NADH oxidase | ≤1.0×10-1% |
Stabilizers | Mg++, Ca++, bovine serum albumin, glycine, lysine |
Stability | Stable at −20℃ for at least one year(Fig.1) |
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Molecular weight | approx. 150,000 (by gel filtration) |
Isoelectric point | 5.25 1) |
Michaelis constants | 8.0×10-5M (HCHO), 1.2×10-4M (NAD+) |
Structure | 2 subunits (75,000) per enzyme molecule 1) |
Inhibitors | Chelating agents, Ni++, Cd++, Hg++, PCMB, ionic detergents |
Optimum pH | 9.0(Fig.4) |
Optimum temperature | 40℃(Fig.5) |
pH Stability | pH 8.0−10.0 (30℃, 16hr)(Fig.6) |
Thermal stability | below 40℃ (pH 7.5, 30min)(Fig.7) |
Substrate specificity | (Table 1) |
Effect of various chemicals | (Table 2,3) |
This enzyme is useful for enzymatic determination of formaldehyde and of hydrogen peroxide when coupled with catalase.
The appearance of diformazan formed by the reduction of nitrotetrazorium blue (NTB) with phenazine methosulfate (PMS)(red) is measured at 570nm by spectrophotometry.
One unit causes the formation of one half micromole of diformazan per minute under the conditions described below.
A. HCHO solution | 10mM[0.08ml of 37% (W/V) HCHO/100ml of 50mM phosphate buffer, pH 7.5 contg. 0.5% Triton X-100](Should be prepared fresh) |
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B. NAD+ solution | 0.4% (40mg NAD+・3H2O/10ml of H2O)(Should be prepared fresh) |
C. PMS-NTB solution | 1.0mg phenazine methosulfate (PMS), 10mg nitrotetrazorium blue (NTB)/10ml of H2O (Store at 4℃ in brownish bottle) |
D. HCl solution | 0.3N |
E. Enzyme diluent | 50mM phosphate buffer, pH 7.5 contg. 0.2% BSA |
1.Prepare the following reaction mixture in a test tube and equilibrate at 37℃ for about 5 minutes
0.5ml | Substrate solution | (A) |
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0.1ml | NAD+ solution | (B) |
0.1ml | PMS-NTB solution | (C) |
Concentration in assay mixture | |
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Phosphate buffer | 21 mM |
HCHO | 4.2 mM |
NAD | 0.46 mM |
PMS | 27 μM |
NTB | 0.10mM |
Triton X-100 | 0.21 % |
2.Add 0.5ml of the enzyme solution* and mix.
3.After exactly 15 minutes at 37℃, add 3.0ml of HCl solution (D) to stop the reaction and measure the optical density at 570nm against water (OD test).
At the same time, prepare the blank by first mixing the reaction mixture with 3.0ml of HCl solution after 15 min-incubation at 37℃, followed by the addition of the enzyme solution (OD blank).
*Dissolve the enzyme preparation in ice-cold enzyme diluent (E) and dilute to 0.01−0.02U/ml with the same buffer, immediately before assay.
Activity can be calculated by using the following formula :
Volume activity (U/ml) =
ΔOD (OD test−OD blank)×Vt×df
20.1×1.0×t×Vs
= ΔOD×0.0279×df
Weight activity (U/mg) = (U/ml)×1/C
Vt | : Total volume (4.2ml) |
Vs | : Sample volume (0.1ml) |
20.1 | : Half a millimolar extinction coefficient of diformazan (cm2/0.5micromole) |
1.0 | : Light path length (cm) |
t | : Reaction time (15 minutes) |
df | : Dilution factor |
C | : Enzyme concentration in dissolution (c mg/ml) |
1)M.Ando, T.Yoshimoto, S.Ogushi, K.Rikitake, S.Shibata and D.Tsuru; J.Biochem., 85, 1165 (1979).
2)Application
D.Tsuru; Creatinine.Rinsho Kensa (Supple), 22, 1331 (1978).
Substrate(final 50mM) | Relative activity(%) |
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HCHO | 100 |
CH3CHO | 47 |
CH3・CH2CHO | 5 |
(CH3)2CH・CHO | 0 |
CH3(CH2)2CHO | 3 |
HO・CHO | 19 |
CH3・CO・CHO | 34 |
Substrate(final 50mM) | Relative activity(%) |
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CH3OH | 0 |
CH3CH2OH | 0 |
CH2OH・CH2OH | 0 |
CH2(OH)・CH(OH)CH2OH | 0 |
HCOOH | 0 |
CH3CH2COOH | 0 |
COOH・COOH | 0 |
(Residual activity after 30 min-treatment at 30℃)
Chemical | Concn.(mM) | Residual activity(%) |
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NiCl2 | 1.0 | 3 |
Zn(OAc)2 | 1.0 | 31 |
MnCl2 | 1.0 | 29 |
CoSO4 | 1.0 | 96 |
FeCl3 | 1.0 | 95 |
FeSO4 | 1.0 | 89 |
BaCl2 | 1.0 | 110 |
Ca(OAc)2 | 1.0 | 122 |
Chemical | Concn.(mM) | Residual activity(%) |
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MgCl2 | 1.0 | 124 |
Pb(OAc)2 | 1.0 | 103 |
HgCl2 | 1.0 | 0.4 |
Cd(OAc)2 | 1.0 | 1.0 |
EDTA | 10 | 53 |
NaCl | 50 | 100 |
KBr | 50 | 93 |
KI | 50 | 51 |
(Residual activity after 30 min-treatment at 30℃)
Detergent | Concn. | Residual activity(%) |
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Emulgen | 0.1 | 101 |
Brij 35 | 0.1 | 101 |
Brij 58 | 0.1 | 102 |
Span 20 | 0.1 | 102 |
Span 80 | 0.1 | 99 |
Tween 20 | 0.1 | 100 |
Detergent | Concn. | Residual activity(%) |
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Triton X-100 | 0.1% | 105 |
Na-cholate | 0.1 | 100 |
DAC | 0.1 | 9 |
SDS | 10 mM | 38 |
NLS | 10 mM | 76 |
Fig.1. Stability (Powder form)
(kept under dry conditions)
Fig.2. Stability (Powder form)
(kept under dry conditions)
Fig.3. Stability (Liquid form)
enzyme concetration: 10U/ml buffer composition:50mM K-phosphate buffer, pH7.5
Fig.4. pH-Activity
37℃,15min-reaction in 50mM buffer solution: pH6-7.6,phosphate; pH7.2-8.8, Tris-HCl; pH8.7-11 Na2CO3;pH11.5-12.5;NaOH-KCI
○,activity for formaldehyde;
●,activity for n-butanol
Fig.5. Temperature activity
15min-reaction in 50mM phosphate buffer, pH7.5
Fig.6. pH-Stability
30℃,16hr-treatment with 50mM buffer solution: pH5.8, acetate;pH6.8-8.0,phosphate pH8.0-10.0 borate
Fig.7. Thermal stability
30min-treatment with 50mM phosphate buffer,pH7.5
1. 原理
生成したNADHによりPMS (phenazine methosulfate)を介してNTB (nitrotetrazorium blue)を還元し,生成したdiformazanの570nmにおける吸光度を測定する。
2.定義
下記条件下で1分間あたり1/2マイクロモルのdiformazanを生成する酵素量を1単位 (U)とする。
3.試薬
酵素溶液:酵素標品を予め氷冷した0.2%BSAを含む50mMリン酸緩衝液,pH7.5で溶解し,分析直前に同緩衝液で0.01~0.02U/mlに希釈する。
4.手順
1.試験管に下記反応混液を調製し,37℃で約5分間予備加温する。
0.5ml | 基質溶液 | (A) |
0.1ml | NAD+溶液 | (B) |
0.1ml | PMS-NTB水溶液 | (C) |
2.酵素溶液0.5mlを加え,反応を開始する。
3.37℃で正確に15分間反応させた後,HCl溶液(D)3.0mlを加えて反応を停止させる。この液につき570nmにおける吸光度を測定する(ODtest)。
4.盲検は反応混液1を37℃で15分間放置後,HCl溶液(D)3.0mlを加えて混和し,次いで酵素溶液0.5mlを加えて調製する。以下同様に吸光度を測定する(ODblank)。
5.計算式
U/ml =
ΔOD (OD test−OD blank)×4.2(㎖)×希釈倍率
20.1×1.0×15(分)×0.5(ml)
= ΔOD×0.0279×希釈倍率 | |
U/mg | = U/ml×1/C |
20.1 | : diformazanの1/2ミリモル分子吸光係数 (cm2/micromole) |
1.0 | : 光路長(cm) |
C | : 溶解時の酵素濃度(c mg/ml) |
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